This is the "Field Guide of NML Bioinformatics Resources" page of the "NML Bioinformatics Field Guide" guide.
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University of Southern California

NML Bioinformatics Field Guide  

Last Updated: Feb 10, 2012 URL: http://norris.usc.libguides.com/FieldGuide Print Guide RSS Updates

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Superchange your research with NML state-of-are bioinformatics resources

 Overview of Bioinformatics Software and Service @ NML

With the support of the Vice President of Research, Dr. Randolph Hall, the Norris Medical Library licensed eight top of the line commercial bioinformatics software for the free use of all USC researchers.  Take a quick tour of the key features of these software and start using them to expedite your research today!  

NML Bioinformatics Service Fact Sheet (Updated Sept 2011)

 Statistical Analysis of High-throughput Data and DNA/Protein Sequence Analysis


  • Microarray and next-gen seq analysis with Partek Genomic Suite (Partek GS) and Partek Flow

(20 min)

  • Microarray analysis using Bioconductor packages and custom CDFs with R GUI software Microarray Я US

(20 min)

  • Genomic variation and genome-wide association studies with Golden Helix SNP and Variation Suite (SVS)

(20 min)

  • DNA/protein sequence manipulation with Vector NTI Advance

(30 min)

 Comprehensive Functional Analysis

  • Overview of functional analysis and literature/data search

(15 min)

  • Understand the biology of genomic data with Ingenuity Pathways Analysis (IPA)

(20 min)

  • Integrated functional analysis with BIOBASE

(40 min)

 Advanced Literature and Data Search and Mining

  • Advanced literature search with IPA and NextBio

(40 min)

  • Genomic data mining and knowledge discovery with NextBio

(40 min)

  • Transcriptome data mining with Genevestigator

(20 min)

  • Cancer gene expression data mining with Oncomine

(15 min)


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